[Cyberduck-trac] [Cyberduck] #10385: Missing files in Cyberduck

[Cyberduck]

#10385: Missing files in Cyberduck
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    Reporter:  gavinband  |      Owner:
        Type:  defect     |     Status:  new
    Priority:  normal     |  Milestone:
   Component:  core       |    Version:  6.6.2
    Severity:  major      |   Keywords:
Architecture:  Intel      |   Platform:  macOS 10.13
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 I'm using Cyberduck v6.6.2 (28219) on Mac OS X 10.13.4 High Sierra.
 On the sites that I have tried to use Cyberduck with, it fails to list
 some files and will fail to download them properly.
 (It also has other strange behaviour, such as failing to list files
 alphabetically when I sort by filename).
 The attached screenshot shows an example - here I've sorted by filename,
 but the files with `chr19` strangely appear at the top of the list, and
 the file `Tanzania_GWAS-2.5M_b37_chr0X_aligned.vcf.gz`is missing from the
 view.  (It is missing from the whole listing although only the top is
 shown in the screenshot).  The second screenshot shows the output of `ls
 done in `sftp` in the same folder, correctly listing the contents of the
 folder.

 Digging a bit further, it appears both programs correctly list 104 files,
 but Cyberduck has duplicated information for some files.  Specifically,
 the top 4 files in the Cyberduck listing
 (`Tanzania_GWAS-2.5M_b37_chr19_aligned.vcf.gz`,
 `Tanzania_GWAS-2.5M_b37_chr19_aligned.vcf.gz.tbi`,
 `Tanzania_GWAS-2.5M_b37_chr19.vcf.gz` and
 `Tanzania_GWAS-2.5M_b37_chr0X.vcf.gz.tbi`) all appear again further down
 the list.  The associated information e.g. file size is also repeated.
 Presumably these duplicate entries replace those for the missing files.

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Ticket URL: <https://trac.cyberduck.io/ticket/10385>
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